MLOC_7249 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.570513.099222.36060
LEAShoots from the seedlings (10 cm shoot stage)14.910915.69289.18650
INF1Young developing inflorescences (5mm)20.950924.557335.90930
INF2Developing inflorescences (1-1.5 cm)45.160342.661653.28180
ROORoots from the seedlings (10 cm shoot stage)10.1811.054326.4490
NODDeveloping tillers at six leaf stage, 3rd internode17.426520.35517.72350
CAR5Developing grain, bracts removed (5 DPA)35.964936.331928.31920
CAR15Developing grain, bracts removed (15 DPA)7.141537.608178.357570



CDS Structure of MLOC_7249






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364479
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364479CUST_20915_PI427708080NoneNoneNone
MLOC_28948.1NoneAvailableNonecontig_1961562 (Not mapped)
MLOC_32479.1NoneAvailableNonecontig_228951 (Mapped)
MLOC_46923.1NoneAvailableNonecontig_297807 (Not mapped)
MLOC_52961.1NoneAvailableAvailablecontig_379365 (Mapped)
MLOC_7249.1NoneAvailableNonecontig_1388630 (Not mapped)
MLOC_79775.1NoneAvailableNonecontig_86906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----