MLOC_72476 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.951952.530212.768182.40928
LEAShoots from the seedlings (10 cm shoot stage)7.239599.367519.694616.54049
INF1Young developing inflorescences (5mm)3.284984.294394.143912.87101
INF2Developing inflorescences (1-1.5 cm)3.857044.408354.230164.04785
ROORoots from the seedlings (10 cm shoot stage)2.011052.421741.690532.29378
NODDeveloping tillers at six leaf stage, 3rd internode3.094453.77463.0639810.1252
CAR5Developing grain, bracts removed (5 DPA)3.44144.169483.888283.21442
CAR15Developing grain, bracts removed (15 DPA)0.9145520.5367040.7989661.54152



CDS Structure of MLOC_72476






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72476.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72476.1CUST_17828_PI427708080AvailableAvailablecontig_6173 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66820.1 -1 1e-84 278 161/285 (56%) 13101.m07231 protein inactive receptor kinase At1g27190 precursor, putative, expressed
TAIR PP10 AT5G16980.1 -2 6e-59 204 97/150 (65%) Zinc-binding dehydrogenase family protein | chr5:5579202-5580383 REVERSE LENGTH=239