MLOC_72452 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4710190.45280.4276550.601046
LEAShoots from the seedlings (10 cm shoot stage)0.3914080.1007950.04781030.204061
INF1Young developing inflorescences (5mm)1.571611.545081.396471.5289
INF2Developing inflorescences (1-1.5 cm)2.200312.776632.513493.0794
ROORoots from the seedlings (10 cm shoot stage)0.5255080.7500680.3951170.962654
NODDeveloping tillers at six leaf stage, 3rd internode0.118190.3446780.3012331.32777
CAR5Developing grain, bracts removed (5 DPA)4.834914.199513.64364.63388
CAR15Developing grain, bracts removed (15 DPA)12.321111.336711.93232.3512



CDS Structure of MLOC_72452






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72452.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72452.1CUST_15801_PI427708080AvailableAvailablecontig_61685 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g02970.1 +2 0.0 587 319/457 (70%) 13102.m00261 protein expressed protein
TAIR PP10 AT2G45620.1 +2 8e-151 454 221/383 (58%) Nucleotidyltransferase family protein | chr2:18792943-18795750 FORWARD LENGTH=764