- Predicted Gene MLOC_72452
MLOC_72452 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72452_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.471019 | 0.4528 | 0.427655 | 0.601046 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.391408 | 0.100795 | 0.0478103 | 0.204061 |
INF1 | Young developing inflorescences (5mm) | 1.57161 | 1.54508 | 1.39647 | 1.5289 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.20031 | 2.77663 | 2.51349 | 3.0794 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.525508 | 0.750068 | 0.395117 | 0.962654 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.11819 | 0.344678 | 0.301233 | 1.32777 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.83491 | 4.19951 | 3.6436 | 4.63388 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.3211 | 11.3367 | 11.932 | 32.3512 |
CDS Structure of MLOC_72452
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72452.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g02970.1 |
+2 |
0.0 |
587 |
319/457 (70%) |
13102.m00261 protein expressed protein |
TAIR PP10 |
AT2G45620.1 |
+2 |
8e-151 |
454 |
221/383 (58%) |
Nucleotidyltransferase family protein | chr2:18792943-18795750 FORWARD LENGTH=764 |