- Predicted Gene MLOC_72443
MLOC_72443 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72443_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72443_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.25412 | 3.46035 | 4.00137 | 3.30984 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.60427 | 0.632842 | 0.522126 | 0.694767 |
INF1 | Young developing inflorescences (5mm) | 0.519247 | 1.23072 | 1.60032 | 0.85485 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.695387 | 1.01695 | 1.29645 | 0.974462 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.00081 | 1.72428 | 2.82669 | 1.63994 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0384664 | 0.0364199 | 0.0163224 | 0.0779585 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0462004 | 0 | 0.12703 |
CDS Structure of MLOC_72443
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72443.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g56610.1 |
-3 |
5e-65 |
211 |
113/114 (99%) |
13102.m06506 protein DUF640 domain containing protein, putative, expressed |
TAIR PP10 |
AT3G23290.2 |
-3 |
6e-60 |
195 |
101/114 (89%) |
| Symbols: LSH4 | Protein of unknown function (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195 |