MLOC_72443 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.254123.460354.001373.30984
LEAShoots from the seedlings (10 cm shoot stage)1.604270.6328420.5221260.694767
INF1Young developing inflorescences (5mm)0.5192471.230721.600320.85485
INF2Developing inflorescences (1-1.5 cm)0.6953871.016951.296450.974462
ROORoots from the seedlings (10 cm shoot stage)1.000811.724282.826691.63994
NODDeveloping tillers at six leaf stage, 3rd internode0.03846640.03641990.01632240.0779585
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.046200400.12703



CDS Structure of MLOC_72443






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72443.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72443.1CUST_9723_PI427708083AvailableAvailablecontig_61665 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56610.1 -3 5e-65 211 113/114 (99%) 13102.m06506 protein DUF640 domain containing protein, putative, expressed
TAIR PP10 AT3G23290.2 -3 6e-60 195 101/114 (89%) | Symbols: LSH4 | Protein of unknown function (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195