- Predicted Gene MLOC_72442
MLOC_72442 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.00998 | 2.93089 | 2.88925 | 4.17122 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.300657 | 0.901246 | 1.50856 | 0.897954 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0805525 | 0.0252578 | 0.437878 | 0.222014 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 22.9454 | 44.5717 | 8.93024 | 57.0596 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0145213 | 0 | 0.11511 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0310324 | 0.293976 | 0.0582568 | 0.207873 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 26.4693 | 21.9293 | 20.4844 | 70.2747 |
CDS Structure of MLOC_72442
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72442.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g46480.2 |
-2 |
4e-34 |
128 |
110/196 (56%) |
13105.m04962 protein late embryogenesis abundant protein, group 3, putative, expressed |
| TAIR PP10 |
AT1G52690.2 |
-2 |
5e-22 |
92 |
72/196 (37%) |
Late embryogenesis abundant protein (LEA) family protein | chr1:19619842-19620589 FORWARD LENGTH=169 |