MLOC_72432 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1968970.08365110.4486970.243484
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.3224380.1446460.08019020.176102
INF2Developing inflorescences (1-1.5 cm)7.156378.503765.984348.99964
ROORoots from the seedlings (10 cm shoot stage)000.2205020.10505
NODDeveloping tillers at six leaf stage, 3rd internode0.05457920.01500110.1094960.100214
CAR5Developing grain, bracts removed (5 DPA)0.172121000.312285
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_72432






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72432.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72432.1CUST_9722_PI427708083AvailableAvailablecontig_61636 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g09720.1 -2 1e-27 107 47/68 (69%) 13101.m01038 protein dof zinc finger domain containing protein, putative
TAIR PP10 AT1G07640.1 -2 3e-25 100 41/57 (72%) | Symbols: OBP2 | Dof-type zinc finger DNA-binding family protein | chr1:2354707-2355534 REVERSE LENGTH=275