MLOC_7242 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)2.469486.470834.990372.80452
INF1Young developing inflorescences (5mm)000.06371040.0475321
INF2Developing inflorescences (1-1.5 cm)00.017117200.019531
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.1003750.03090050.09917150.140469
CAR5Developing grain, bracts removed (5 DPA)000.02715580.0141933
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_7242






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7242.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7242.2CUST_17827_PI427708080AvailableAvailablecontig_138847 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g24954.1 -1 2e-96 185 119/284 (42%) 13110.m02098 protein ulp1 protease family, C-terminal catalytic domain containing protein
TAIR PP10 AT3G21670.1 -3 2e-14 77 36/47 (77%) Major facilitator superfamily protein | chr3:7626942-7628954 REVERSE LENGTH=590