MLOC_72410 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.171631.368872.298011.50209
LEAShoots from the seedlings (10 cm shoot stage)3.536135.60633.870183.44944
INF1Young developing inflorescences (5mm)2.049212.041893.324982.0741
INF2Developing inflorescences (1-1.5 cm)1.612591.711292.726942.12816
ROORoots from the seedlings (10 cm shoot stage)4.041895.856575.799146.42645
NODDeveloping tillers at six leaf stage, 3rd internode12.234910.611311.989931.1184
CAR5Developing grain, bracts removed (5 DPA)2.406151.764441.204391.76443
CAR15Developing grain, bracts removed (15 DPA)0.07247150.7160380.5281871.03951



CDS Structure of MLOC_72410






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72410.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368987NoneNoneNoneNone
MLOC_72410.1CUST_465_PI427708083AvailableAvailablecontig_61591 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61810.1 +3 2e-79 241 122/162 (75%) 13103.m06812 protein tRNA-specific adenosine deaminase, putative, expressed
TAIR PP10 AT5G28050.1 +3 1e-71 220 108/162 (67%) Cytidine/deoxycytidylate deaminase family protein | chr5:10044209-10045755 REVERSE LENGTH=185