- Predicted Gene MLOC_72410
MLOC_72410 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.17163 | 1.36887 | 2.29801 | 1.50209 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.53613 | 5.6063 | 3.87018 | 3.44944 |
INF1 | Young developing inflorescences (5mm) | 2.04921 | 2.04189 | 3.32498 | 2.0741 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.61259 | 1.71129 | 2.72694 | 2.12816 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.04189 | 5.85657 | 5.79914 | 6.42645 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.2349 | 10.6113 | 11.9899 | 31.1184 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.40615 | 1.76444 | 1.20439 | 1.76443 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0724715 | 0.716038 | 0.528187 | 1.03951 |
CDS Structure of MLOC_72410
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72410.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g61810.1 |
+3 |
2e-79 |
241 |
122/162 (75%) |
13103.m06812 protein tRNA-specific adenosine deaminase, putative, expressed |
TAIR PP10 |
AT5G28050.1 |
+3 |
1e-71 |
220 |
108/162 (67%) |
Cytidine/deoxycytidylate deaminase family protein | chr5:10044209-10045755 REVERSE LENGTH=185 |