MLOC_72408 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.448024.399283.172910
LEAShoots from the seedlings (10 cm shoot stage)4.545131.530395.574950
INF1Young developing inflorescences (5mm)8.812755.011914.728980
INF2Developing inflorescences (1-1.5 cm)9.974737.650546.050810
ROORoots from the seedlings (10 cm shoot stage)03.364321.442210
NODDeveloping tillers at six leaf stage, 3rd internode2.34122.64952.581390
CAR5Developing grain, bracts removed (5 DPA)6.456015.728574.684670
CAR15Developing grain, bracts removed (15 DPA)3.312993.849393.086080



CDS Structure of MLOC_72408






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372981
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372981CUST_25700_PI427708080NoneNoneNone
MLOC_27017.2NoneAvailableNonecontig_179813 (Mapped)
MLOC_30834.2NoneAvailableNonecontig_2131226 (Not mapped)
MLOC_35437.1NoneAvailableNonecontig_248500 (Mapped)
MLOC_41464.1NoneAvailableNonecontig_2589432 (Mapped)
MLOC_46635.1NoneAvailableAvailablecontig_293496 (Not mapped)
MLOC_67335.1NoneAvailableNonecontig_52913 (Mapped)
MLOC_72408.1NoneAvailableNonecontig_615881 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----