MLOC_7236 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains05.6872706.43915
LEAShoots from the seedlings (10 cm shoot stage)016.27769.196768.05641
INF1Young developing inflorescences (5mm)7.061234.321465.444983.94149
INF2Developing inflorescences (1-1.5 cm)19.59049.634577.716412.2045
ROORoots from the seedlings (10 cm shoot stage)01.4551805.24607
NODDeveloping tillers at six leaf stage, 3rd internode1.274181.6403905.17994
CAR5Developing grain, bracts removed (5 DPA)14.64575.100757.786337.3148
CAR15Developing grain, bracts removed (15 DPA)1.512764.7506711.17697.62354



CDS Structure of MLOC_7236






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7236.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7236.1CUST_9711_PI427708083AvailableAvailablecontig_138847 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g28820.1 -2 8e-22 90 41/46 (89%) 13104.m02732 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----