MLOC_72347 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.021740.579733.315142.5877
LEAShoots from the seedlings (10 cm shoot stage)10.10531.584733.368224.17657
INF1Young developing inflorescences (5mm)9.679949.671910.1279.24462
INF2Developing inflorescences (1-1.5 cm)4.4168710.68296.843359.47053
ROORoots from the seedlings (10 cm shoot stage)15.773610.733210.559714.4404
NODDeveloping tillers at six leaf stage, 3rd internode6.212053.274370.1905026.51523
CAR5Developing grain, bracts removed (5 DPA)7.1228512.28297.5757510.5146
CAR15Developing grain, bracts removed (15 DPA)0.1211140.1383710.6213220.661794



CDS Structure of MLOC_72347






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72347.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361417NoneNoneNoneNone
MLOC_72347.1CUST_6145_PI427708080AvailableAvailablecontig_61471 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g12580.1 +1 3e-15 70 33/38 (87%) 13105.m01366 protein conserved hypothetical protein
TAIR PP10 AT2G46330.1 +1 3e-14 66 31/38 (82%) | Symbols: AGP16, ATAGP16 | arabinogalactan protein 16 | chr2:19018730-19019108 REVERSE LENGTH=73