MLOC_7234 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 54.0783 | 41.595 | 46.1603 | 53.6758 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 67.2783 | 82.5784 | 78.2398 | 72.39 |
| INF1 | Young developing inflorescences (5mm) | 14.8164 | 15.5649 | 19.2033 | 16.9847 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.5457 | 22.3221 | 27.4719 | 33.2897 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 130.35 | 94.6865 | 112.262 | 146.604 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 141.556 | 169.373 | 253.322 | 635.581 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.528 | 12.1947 | 10.7096 | 14.1877 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.8576 | 10.3664 | 9.24275 | 29.8099 |
CDS Structure of MLOC_7234
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7234.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g47000.1 |
-1 |
1e-79 |
241 |
133/157 (85%) |
13102.m05285 protein expressed protein |
| TAIR PP10 |
AT1G31940.1 |
-1 |
7e-40 |
138 |
81/150 (54%) |
unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11470293-11471154 REVERSE LENGTH=158 |
