- Predicted Gene MLOC_72338
MLOC_72338 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72338_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72338_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2214.52 | 1571.78 | 1470.2 | 1870.8 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 688.588 | 273.621 | 297.402 | 379.597 |
INF1 | Young developing inflorescences (5mm) | 2190.54 | 2272.19 | 2219.73 | 2083.1 |
INF2 | Developing inflorescences (1-1.5 cm) | 1603.93 | 1234.55 | 1338.81 | 1634.77 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1033.35 | 1202.98 | 1496.85 | 1568.63 |
NOD | Developing tillers at six leaf stage, 3rd internode | 110.675 | 53.4476 | 105.903 | 235.609 |
CAR5 | Developing grain, bracts removed (5 DPA) | 550.426 | 586.303 | 549.559 | 604.751 |
CAR15 | Developing grain, bracts removed (15 DPA) | 254.572 | 226.624 | 236.122 | 601.062 |
CDS Structure of MLOC_72338
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72338.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g09510.1 |
-1 |
5e-28 |
105 |
81/114 (71%) |
13101.m01011 protein 60S acidic ribosomal protein, putative, expressed |
TAIR PP10 |
AT2G27710.4 |
-1 |
1e-17 |
77 |
37/61 (61%) |
60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=98 |