MLOC_72310 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.90352.248234.516231.82952
LEAShoots from the seedlings (10 cm shoot stage)3.404650.9040541.242031.40423
INF1Young developing inflorescences (5mm)6.779727.655178.856874.37898
INF2Developing inflorescences (1-1.5 cm)7.217087.458228.134836.24187
ROORoots from the seedlings (10 cm shoot stage)4.141593.782390.4367213.14903
NODDeveloping tillers at six leaf stage, 3rd internode2.220133.142973.805288.07569
CAR5Developing grain, bracts removed (5 DPA)3.385884.407095.625872.98801
CAR15Developing grain, bracts removed (15 DPA)1.200172.284931.970022.6634



CDS Structure of MLOC_72310






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72310.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72310.2CUST_13134_PI427708083AvailableAvailablecontig_61423 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT3G12380.1 +1 2e-22 97 43/71 (61%) | Symbols: ATARP5, ARP5 | actin-related protein 5 | chr3:3938309-3941785 REVERSE LENGTH=724