MLOC_72289 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.687413.712763.686983.76344
LEAShoots from the seedlings (10 cm shoot stage)0.8224430.4660350.5432810.468565
INF1Young developing inflorescences (5mm)1.715461.740021.424121.4398
INF2Developing inflorescences (1-1.5 cm)0.3483860.5750960.3498530.506499
ROORoots from the seedlings (10 cm shoot stage)6.091193.078313.310523.60004
NODDeveloping tillers at six leaf stage, 3rd internode4.928366.260050.62147811.2323
CAR5Developing grain, bracts removed (5 DPA)0.9722151.215561.484621.25685
CAR15Developing grain, bracts removed (15 DPA)3.122023.077152.920197.80572



CDS Structure of MLOC_72289






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72289.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72289.1CUST_15786_PI427708080AvailableAvailablecontig_61377 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g36670.1 -3 2e-87 273 166/202 (82%) 13106.m03794 protein bet v I allergen family protein, putative, expressed
TAIR PP10 AT2G26040.1 -3 5e-54 184 109/177 (62%) | Symbols: PYL2, RCAR14 | PYR1-like 2 | chr2:11094832-11095404 REVERSE LENGTH=190