MLOC_72278 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.441122.847083.305312.9123
LEAShoots from the seedlings (10 cm shoot stage)2.456471.159681.480481.34333
INF1Young developing inflorescences (5mm)0.2657760.4112830.4665470.30327
INF2Developing inflorescences (1-1.5 cm)2.130060.354730.5974291.09085
ROORoots from the seedlings (10 cm shoot stage)3.106271.8343.135272.23999
NODDeveloping tillers at six leaf stage, 3rd internode2.707822.201530.2839684.59902
CAR5Developing grain, bracts removed (5 DPA)71.909780.133468.195665.4532
CAR15Developing grain, bracts removed (15 DPA)11437.58523.119367.9722231.8



CDS Structure of MLOC_72278






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72278.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72278.1CUST_15785_PI427708080AvailableAvailablecontig_61360 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g12080.1 -3 1e-30 115 53/114 (46%) 13107.m01242 protein LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10None-----