MLOC_7227 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3920880.5073880.356650.452215
LEAShoots from the seedlings (10 cm shoot stage)1.007920.09247430.2519510.391928
INF1Young developing inflorescences (5mm)0.2681930.4755090.4338570.360396
INF2Developing inflorescences (1-1.5 cm)0.1723190.08008870.1644190.148286
ROORoots from the seedlings (10 cm shoot stage)1.971940.2316041.061770.710179
NODDeveloping tillers at six leaf stage, 3rd internode00.04863210.06955580.1643
CAR5Developing grain, bracts removed (5 DPA)00.0968330.05286060.0556871
CAR15Developing grain, bracts removed (15 DPA)0.581020.8373110.3908911.56448



CDS Structure of MLOC_7227






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7227.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7227.1NoneAvailableAvailablecontig_138833 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61980.1 -1 3e-60 205 99/115 (86%) 13103.m06833 protein cytochrome P450, putative, expressed
TAIR PP10 AT4G19230.1 -1 2e-14 74 40/111 (36%) | Symbols: CYP707A1 | cytochrome P450, family 707, subfamily A, polypeptide 1 | chr4:10521524-10523517 FORWARD LENGTH=467