MLOC_7226 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2032260.4624730.6066180.515269
LEAShoots from the seedlings (10 cm shoot stage)0.8913950.2092990.3307710.396768
INF1Young developing inflorescences (5mm)0.7922490.6708680.4961380.643539
INF2Developing inflorescences (1-1.5 cm)0.2438770.137890.2887850.26686
ROORoots from the seedlings (10 cm shoot stage)0.3952080.7055560.9015860.909569
NODDeveloping tillers at six leaf stage, 3rd internode0.03714850.03380890.03496690.0979096
CAR5Developing grain, bracts removed (5 DPA)0.1752760.05550990.1661710.144306
CAR15Developing grain, bracts removed (15 DPA)0.1569330.09142220.2292890.417439



CDS Structure of MLOC_7226






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7226.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7226.3NoneAvailableAvailablecontig_138833 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61980.1 -2 4e-40 147 82/145 (57%) 13103.m06833 protein cytochrome P450, putative, expressed
TAIR PP10 AT5G45340.1 -2 2e-34 107 53/117 (45%) | Symbols: CYP707A3 | cytochrome P450, family 707, subfamily A, polypeptide 3 | chr5:18368977-18370909 REVERSE LENGTH=463