MLOC_7225 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 32.0138 | 34.3176 | 29.4706 | 33.3512 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.1553 | 13.4863 | 11.5921 | 12.1083 |
| INF1 | Young developing inflorescences (5mm) | 44.7013 | 54.4173 | 50.3205 | 44.1564 |
| INF2 | Developing inflorescences (1-1.5 cm) | 33.1509 | 22.5915 | 29.6644 | 30.497 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 51.1725 | 65.7489 | 76.8007 | 80.2144 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.1555 | 8.93947 | 12.8963 | 32.7189 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.52616 | 6.12843 | 6.45146 | 5.85589 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.74787 | 3.29791 | 4.8264 | 10.071 |
CDS Structure of MLOC_7225
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7225.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g61990.5 |
+3 |
3e-50 |
175 |
119/142 (84%) |
13103.m06834 protein glycine-rich RNA-binding protein 7, putative, expressed |
| TAIR PP10 |
AT3G26420.1 |
+3 |
5e-42 |
152 |
86/142 (61%) |
| Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | chr3:9671953-9673055 FORWARD LENGTH=245 |
