MLOC_7224 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.80526 | 5.01686 | 4.27145 | 5.76423 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.181 | 41.3584 | 42.1407 | 35.9452 |
| INF1 | Young developing inflorescences (5mm) | 1.26653 | 1.2108 | 1.10222 | 1.20974 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.37221 | 1.5268 | 1.71821 | 2.40618 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.9167 | 20.4798 | 15.9302 | 29.3482 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.31028 | 5.17153 | 6.23097 | 20.0472 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.7696 | 1.29555 | 1.68697 | 1.88764 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.0069 | 2.12317 | 1.97949 | 5.87712 |
CDS Structure of MLOC_7224
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7224.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g07360.1 |
-2 |
0.0 |
598 |
335/451 (74%) |
13103.m00819 protein expressed protein |
| TAIR PP10 |
AT3G47500.1 |
-2 |
1e-56 |
200 |
163/477 (34%) |
| Symbols: CDF3 | cycling DOF factor 3 | chr3:17504276-17505964 REVERSE LENGTH=448 |
