MLOC_72217 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.927890.9629321.319581.27333
LEAShoots from the seedlings (10 cm shoot stage)1.078710.05251690.3818010.406501
INF1Young developing inflorescences (5mm)0.6523220.6856160.7482080.638751
INF2Developing inflorescences (1-1.5 cm)0.9199770.6826360.6676320.885288
ROORoots from the seedlings (10 cm shoot stage)0.9768730.8529711.022780.971203
NODDeveloping tillers at six leaf stage, 3rd internode4.46556.090830.131611.172
CAR5Developing grain, bracts removed (5 DPA)0.5877010.3913060.602980.53226
CAR15Developing grain, bracts removed (15 DPA)0.4015960.3402290.1376410.814868



CDS Structure of MLOC_72217






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72217.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72217.2CUST_15778_PI427708080AvailableAvailablecontig_61250 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g33530.1 -1 0.0 732 358/438 (82%) 13104.m03245 protein Ser/Thr protein phosphatase family protein, putative, expressed
TAIR PP10 AT3G52820.1 -1 3e-177 511 248/421 (59%) | Symbols: ATPAP22, PAP22 | purple acid phosphatase 22 | chr3:19574236-19576938 REVERSE LENGTH=434