MLOC_72191 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.131023.39523.86024.53092
LEAShoots from the seedlings (10 cm shoot stage)3.65972.192653.267242.60483
INF1Young developing inflorescences (5mm)7.041816.35837.745065.8756
INF2Developing inflorescences (1-1.5 cm)6.43196.678577.82427.35129
ROORoots from the seedlings (10 cm shoot stage)3.875924.378134.303885.08157
NODDeveloping tillers at six leaf stage, 3rd internode2.109921.905212.346.48231
CAR5Developing grain, bracts removed (5 DPA)4.171694.270974.823224.26479
CAR15Developing grain, bracts removed (15 DPA)1.678730.9095632.09773.33049



CDS Structure of MLOC_72191






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72191.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72191.1CUST_15773_PI427708080AvailableAvailablecontig_61217 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g42880.1 +1 1e-100 302 151/168 (90%) 13103.m04613 protein nucleotide-binding protein-like, putative, expressed
TAIR PP10 AT4G19540.1 +1 1e-126 373 181/270 (67%) | Symbols: INDL | IND1(iron-sulfur protein required for NADH dehydrogenase)-like | chr4:10657517-10659094 FORWARD LENGTH=313