- Predicted Gene MLOC_72188
MLOC_72188 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72188_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72188_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.16454 | 1.34307 | 1.25077 | 1.70678 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.80816 | 0.260073 | 1.11873 | 1.74534 |
INF1 | Young developing inflorescences (5mm) | 4.85273 | 5.87481 | 5.0151 | 5.17347 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.34002 | 4.32514 | 3.15937 | 4.83765 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.14598 | 1.76985 | 2.56132 | 2.49556 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.224353 | 0.798759 | 0.619431 | 2.3125 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.13306 | 1.48059 | 1.53946 | 1.7106 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.197966 | 0.260969 | 0.180798 | 0.651808 |
CDS Structure of MLOC_72188
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72188.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g46340.1 |
-1 |
2e-154 |
454 |
248/304 (82%) |
13101.m04760 protein chloroplast unusual positioning protein, putative, expressed |
TAIR PP10 |
AT4G18570.1 |
-1 |
2e-115 |
353 |
193/292 (66%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:10231439-10234534 FORWARD LENGTH=642 |