- Predicted Gene MLOC_72178
MLOC_72178 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72178_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72178_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.99649 | 5.82941 | 5.13359 | 6.19321 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.42319 | 3.58128 | 3.2522 | 4.22457 |
INF1 | Young developing inflorescences (5mm) | 21.9393 | 17.9693 | 17.3967 | 19.0784 |
INF2 | Developing inflorescences (1-1.5 cm) | 66.6522 | 65.0135 | 62.9211 | 86.9637 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.31422 | 3.90171 | 2.86112 | 5.55931 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.9909 | 8.57524 | 11.5816 | 37.0722 |
CAR5 | Developing grain, bracts removed (5 DPA) | 34.4721 | 34.2766 | 33.8465 | 42.1919 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.2314 | 8.31412 | 7.58677 | 22.9095 |
CDS Structure of MLOC_72178
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72178.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g44230.2 |
-3 |
7e-129 |
387 |
185/298 (62%) |
13101.m04586 protein transcription factor X1, putative, expressed |
TAIR PP10 |
AT3G48670.2 |
-3 |
4e-59 |
205 |
118/323 (37%) |
| Symbols: IDN2, RDM12 | XH/XS domain-containing protein | chr3:18031240-18033615 FORWARD LENGTH=647 |