- Predicted Gene MLOC_72172
MLOC_72172 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.574442 | 0.49447 | 0.272768 | 0.575814 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.160154 | 0 | 0.0608333 | 0.103553 |
| INF1 | Young developing inflorescences (5mm) | 1.02319 | 1.4097 | 1.26262 | 1.31382 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.82994 | 0.727902 | 0.830564 | 1.06097 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.376428 | 0.152449 | 0.269611 | 0.286331 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0459409 | 0.117005 | 0.0985266 | 0.393209 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.941607 | 0.945859 | 0.867061 | 1.14814 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.610019 | 0.167763 | 0.433542 | 1.09041 |
CDS Structure of MLOC_72172
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72172.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g17830.1 |
-1 |
2e-135 |
391 |
188/216 (87%) |
13106.m01956 protein oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed |
| TAIR PP10 |
AT2G22260.1 |
-1 |
7e-97 |
294 |
140/215 (65%) |
oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr2:9461342-9463053 FORWARD LENGTH=314 |