MLOC_72171 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.460627.662425.428427.5122
LEAShoots from the seedlings (10 cm shoot stage)35.046630.038523.046127.9412
INF1Young developing inflorescences (5mm)77.358279.331181.614368.283
INF2Developing inflorescences (1-1.5 cm)79.412779.478477.289392.3948
ROORoots from the seedlings (10 cm shoot stage)7.6350416.577513.836521.6284
NODDeveloping tillers at six leaf stage, 3rd internode16.334320.481423.471483.9213
CAR5Developing grain, bracts removed (5 DPA)26.723926.702129.178429.1599
CAR15Developing grain, bracts removed (15 DPA)11.95219.4226411.609925.9506



CDS Structure of MLOC_72171






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72171.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72171.4CUST_15770_PI427708080AvailableAvailablecontig_6118 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g17840.1 +1 0.0 601 332/576 (58%) 13106.m01957 protein expressed protein
TAIR PP10 AT5G47690.2 +1 1e-61 227 165/444 (37%) binding | chr5:19317899-19327014 FORWARD LENGTH=1606