- Predicted Gene MLOC_72171
MLOC_72171 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.4606 | 27.6624 | 25.4284 | 27.5122 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 35.0466 | 30.0385 | 23.0461 | 27.9412 |
| INF1 | Young developing inflorescences (5mm) | 77.3582 | 79.3311 | 81.6143 | 68.283 |
| INF2 | Developing inflorescences (1-1.5 cm) | 79.4127 | 79.4784 | 77.2893 | 92.3948 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.63504 | 16.5775 | 13.8365 | 21.6284 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 16.3343 | 20.4814 | 23.4714 | 83.9213 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.7239 | 26.7021 | 29.1784 | 29.1599 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.9521 | 9.42264 | 11.6099 | 25.9506 |
CDS Structure of MLOC_72171
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72171.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g17840.1 |
+1 |
0.0 |
601 |
332/576 (58%) |
13106.m01957 protein expressed protein |
| TAIR PP10 |
AT5G47690.2 |
+1 |
1e-61 |
227 |
165/444 (37%) |
binding | chr5:19317899-19327014 FORWARD LENGTH=1606 |