- Predicted Gene MLOC_72170
MLOC_72170 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1596.63 | 1412.93 | 1442.82 | 1537.79 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 621.271 | 438.11 | 447.584 | 445.975 |
| INF1 | Young developing inflorescences (5mm) | 615.589 | 610.817 | 525.138 | 522.943 |
| INF2 | Developing inflorescences (1-1.5 cm) | 292.741 | 365.738 | 338.933 | 387.514 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1395.78 | 1606.09 | 1448.68 | 1996.6 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 852.111 | 565.335 | 324.808 | 1962.11 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1065.56 | 962.322 | 895.616 | 1012.84 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1061.34 | 1100.95 | 815.475 | 2433.83 |
CDS Structure of MLOC_72170
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72170.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g40950.1 |
+1 |
0.0 |
597 |
313/337 (93%) |
13104.m04007 protein glyceraldehyde-3-phosphate dehydrogenase, putative, expressed |
| TAIR PP10 |
AT3G04120.1 |
+1 |
0.0 |
551 |
288/330 (87%) |
| Symbols: GAPC, GAPC-1, GAPC1 | glyceraldehyde-3-phosphate dehydrogenase C subunit 1 | chr3:1081077-1083131 FORWARD LENGTH=338 |