MLOC_7216 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.87329 | 5.28697 | 4.60792 | 5.47008 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.54482 | 5.05605 | 6.94381 | 5.56417 |
| INF1 | Young developing inflorescences (5mm) | 30.5761 | 34.8313 | 39.4836 | 28.3203 |
| INF2 | Developing inflorescences (1-1.5 cm) | 44.7242 | 41.272 | 41.5636 | 46.5628 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.00845 | 4.87677 | 3.63224 | 5.75863 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.02586 | 1.95099 | 5.26984 | 8.61237 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.21575 | 9.8111 | 9.82729 | 9.48154 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.72243 | 4.22906 | 3.20719 | 9.65261 |
CDS Structure of MLOC_7216
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7216.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g51790.1 |
-2 |
0.0 |
597 |
298/365 (82%) |
13105.m05600 protein RecF/RecN/SMC N terminal domain containing protein, expressed |
| TAIR PP10 |
AT5G15920.1 |
-2 |
4e-149 |
457 |
230/354 (65%) |
| Symbols: SMC5 | structural maintenance of chromosomes 5 | chr5:5196210-5199559 FORWARD LENGTH=1053 |
