MLOC_72157 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2613471.186141.076611.00479
LEAShoots from the seedlings (10 cm shoot stage)13.018853.1582130.85659.9264
INF1Young developing inflorescences (5mm)00.036968700.0384627
INF2Developing inflorescences (1-1.5 cm)0.8066010.8253541.211571.04731
ROORoots from the seedlings (10 cm shoot stage)7.669845.399464.765827.2102
NODDeveloping tillers at six leaf stage, 3rd internode0.030291500.01075850.0184734
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)000.1041980.248474



CDS Structure of MLOC_72157






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72157.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356709NoneNoneNoneNone
MLOC_72157.3CUST_18418_PI427708080AvailableAvailablecontig_60742 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g31540.1 -3 1e-73 235 131/212 (62%) 13111.m03057 protein BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
TAIR PP10 AT1G71830.1 -3 6e-65 221 120/191 (63%) | Symbols: SERK1, ATSERK1 | somatic embryogenesis receptor-like kinase 1 | chr1:27018575-27021842 FORWARD LENGTH=625