MLOC_72148 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2113710.640010.3334450.438781
LEAShoots from the seedlings (10 cm shoot stage)0.5568770.5174040.3048130.373204
INF1Young developing inflorescences (5mm)0.1740120.13692100.142393
INF2Developing inflorescences (1-1.5 cm)0.112020.2841280.1002630.202289
ROORoots from the seedlings (10 cm shoot stage)0.09200950.21375100.303388
NODDeveloping tillers at six leaf stage, 3rd internode0.03846760.03444630.01359140.0854633
CAR5Developing grain, bracts removed (5 DPA)0.1423930.1747440.1520750.143032
CAR15Developing grain, bracts removed (15 DPA)0.184970.049612500.389925



CDS Structure of MLOC_72148






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72148.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72148.1CUST_15768_PI427708080AvailableAvailablecontig_61155 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g45920.1 +3 5e-16 81 35/68 (51%) 13107.m04835 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----