MLOC_7214 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8223621.156071.701071.21029
LEAShoots from the seedlings (10 cm shoot stage)0.1740260.210440.4052920.213877
INF1Young developing inflorescences (5mm)0.0639570.025669500.0412818
INF2Developing inflorescences (1-1.5 cm)0.04528380.02182730.02574690.0370922
ROORoots from the seedlings (10 cm shoot stage)10.95655.851194.931256.78754
NODDeveloping tillers at six leaf stage, 3rd internode0.05370410.02003690.1539250.138621
CAR5Developing grain, bracts removed (5 DPA)0.02703020.05161450.02537540.0392188
CAR15Developing grain, bracts removed (15 DPA)0.1573320.1718210.2777420.513743



CDS Structure of MLOC_7214






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7214.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7214.2CUST_15765_PI427708080AvailableAvailablecontig_138818 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g51780.1 +1 2e-90 288 204/356 (57%) 13105.m05599 protein zinc finger, C3HC4 type domain containing protein, expressed
TAIR PP10 AT2G20030.1 +1 2e-48 175 131/367 (36%) RING/U-box superfamily protein | chr2:8647813-8648985 FORWARD LENGTH=390