MLOC_72132 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.2727.342347.64258.32789
LEAShoots from the seedlings (10 cm shoot stage)4.405030.9378261.596111.83216
INF1Young developing inflorescences (5mm)16.29422.031925.224919.4322
INF2Developing inflorescences (1-1.5 cm)18.861321.748921.136325.163
ROORoots from the seedlings (10 cm shoot stage)7.279327.447338.398879.2754
NODDeveloping tillers at six leaf stage, 3rd internode6.732237.274897.2232221.5982
CAR5Developing grain, bracts removed (5 DPA)5.914246.248755.551136.53753
CAR15Developing grain, bracts removed (15 DPA)0.7576560.9666130.7653752.22758



CDS Structure of MLOC_72132






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72132.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364094NoneNoneNoneNone
MLOC_72132.1CUST_460_PI427708083AvailableAvailablecontig_6111 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g09420.1 -2 7e-31 120 117/237 (49%) 13106.m01011 protein B3 DNA binding domain containing protein, expressed
TAIR PP10 AT3G19184.1 -2 4e-15 75 63/181 (35%) AP2/B3-like transcriptional factor family protein | chr3:6637555-6639035 FORWARD LENGTH=277