MLOC_72113 FPKM values

FPKM by Treatment	FPKM by Replicate

Treatment ID	Treatment Description	Rep 1 FPKM	Rep 2 FPKM	Rep 3 FPKM	Treatment FPKM
EMB	4-day embryos dissected from germinating grains	0.184506	0.15931	0.11208	0.140668
LEA	Shoots from the seedlings (10 cm shoot stage)	0.396363	1.0658	0.136777	0.383558
INF1	Young developing inflorescences (5mm)	0.0678344	0.455334	0.352807	0.224749
INF2	Developing inflorescences (1-1.5 cm)	0.684034	0.185328	0.161035	0.381988
ROO	Roots from the seedlings (10 cm shoot stage)	0	0.82543	0.474455	0.963575
NOD	Developing tillers at six leaf stage, 3rd internode	0.373456	0.347143	0.306996	0.806145
CAR5	Developing grain, bracts removed (5 DPA)	0.389678	0.216771	0.249874	0.243843
CAR15	Developing grain, bracts removed (15 DPA)	0.0776267	0.168559	0.22271	0.326433

CDS Structure of MLOC_72113

Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72113.1

Cluster member	Probe ID	FPKM by replicate	FPKM by treatment	Source Contig
MLOC_72113.1	CUST_15760_PI427708080	Available	Available	contig_61082 (Mapped)

Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

Database	Hit	Frame	E-value	Score	% Identity	Description
Rice PP6	LOC_Os06g41610.1	-3	8e-20	90	69/223 (31%)	13106.m04345 protein retrotransposon protein, putative, unclassified
TAIR PP10	AT5G48050.1	-3	5e-13	69	38/141 (27%)	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19472661-19473770 REVERSE LENGTH=369