MLOC_72112 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.635394.104012.967722.69161
LEAShoots from the seedlings (10 cm shoot stage)57.8411113.701106.83859.2167
INF1Young developing inflorescences (5mm)14.52419.528415.656410.5638
INF2Developing inflorescences (1-1.5 cm)14.242914.815511.845111.9613
ROORoots from the seedlings (10 cm shoot stage)2.852173.01146.47232.9591
NODDeveloping tillers at six leaf stage, 3rd internode23.356425.020233.072965.5964
CAR5Developing grain, bracts removed (5 DPA)3.475123.115254.848312.62632
CAR15Developing grain, bracts removed (15 DPA)0.4697290.4743261.386371.21083



CDS Structure of MLOC_72112






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72112.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72112.4CUST_13129_PI427708083AvailableAvailablecontig_61082 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05600.6 +2 2e-43 150 78/96 (81%) 13105.m00590 protein ATA15 protein, putative, expressed
TAIR PP10 AT1G66330.2 +2 2e-35 130 68/92 (74%) senescence-associated family protein | chr1:24729880-24732144 REVERSE LENGTH=417