MLOC_72099 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.846512.114812.034081.84923
LEAShoots from the seedlings (10 cm shoot stage)1.927810.6643940.8161021.04074
INF1Young developing inflorescences (5mm)3.276563.463914.281143.20275
INF2Developing inflorescences (1-1.5 cm)10.01999.192778.4744710.2715
ROORoots from the seedlings (10 cm shoot stage)0.6780051.064071.87881.42109
NODDeveloping tillers at six leaf stage, 3rd internode5.691595.495885.3250519.2686
CAR5Developing grain, bracts removed (5 DPA)5.77045.964765.874685.79489
CAR15Developing grain, bracts removed (15 DPA)1.506151.490931.429473.52356



CDS Structure of MLOC_72099






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72099.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72099.3CUST_15758_PI427708080AvailableAvailablecontig_61046 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g39260.1 +3 0.0 564 369/628 (59%) 13101.m04007 protein OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed
TAIR PP10 AT2G26140.1 +3 1e-177 533 353/611 (58%) | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-11135126 REVERSE LENGTH=717