MLOC_72096 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.80726.967927.346222.0973
LEAShoots from the seedlings (10 cm shoot stage)15.062516.683917.701210.9337
INF1Young developing inflorescences (5mm)12.18611.91889.869957.80237
INF2Developing inflorescences (1-1.5 cm)6.608047.28728.29136.37016
ROORoots from the seedlings (10 cm shoot stage)27.930529.726827.252525.5364
NODDeveloping tillers at six leaf stage, 3rd internode10.67618.776888.6104521.9377
CAR5Developing grain, bracts removed (5 DPA)13.140314.361313.410110.2044
CAR15Developing grain, bracts removed (15 DPA)5.466515.11415.166779.96783



CDS Structure of MLOC_72096






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72096.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252942.1NoneNoneNoneNone
MLOC_72096.1CUST_6121_PI427708080AvailableAvailablecontig_6104 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g32230.1 -3 0.0 569 276/300 (92%) 13107.m03259 protein domain of unknown function domain containing protein, expressed
TAIR PP10 AT4G21570.1 -3 6e-152 466 220/293 (75%) Protein of unknown function (DUF300) | chr4:11471126-11472269 REVERSE LENGTH=294