MLOC_72084 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.971937.252335.099833.4574
LEAShoots from the seedlings (10 cm shoot stage)81.913754.955752.355351.7555
INF1Young developing inflorescences (5mm)28.330519.007919.575418.4741
INF2Developing inflorescences (1-1.5 cm)27.528431.716630.206931.5991
ROORoots from the seedlings (10 cm shoot stage)20.82822.304422.741624.7759
NODDeveloping tillers at six leaf stage, 3rd internode8.4816210.127519.478236.9215
CAR5Developing grain, bracts removed (5 DPA)51.646646.67845.03744.7647
CAR15Developing grain, bracts removed (15 DPA)10.806412.77659.4174924.844



CDS Structure of MLOC_72084






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72084.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252868.1NoneNoneNoneNone
MLOC_72084.2CUST_6120_PI427708080AvailableAvailablecontig_61025 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g11740.1 +3 0.0 961 519/623 (83%) 13102.m01266 protein plastidic ATP/ADP-transporter, putative, expressed
TAIR PP10 AT1G80300.1 +3 0.0 766 396/517 (77%) | Symbols: NTT1, ATNTT1 | nucleotide transporter 1 | chr1:30191954-30194280 FORWARD LENGTH=624