MLOC_72076 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.175424.01218.995624.1514
LEAShoots from the seedlings (10 cm shoot stage)0.4469655.754232.794552.2034
INF1Young developing inflorescences (5mm)0.6062820.8331040.7605360.654538
INF2Developing inflorescences (1-1.5 cm)0.4035860.1453680.1374980.261079
ROORoots from the seedlings (10 cm shoot stage)184.485109.1176.6655109.364
NODDeveloping tillers at six leaf stage, 3rd internode1.880450.6306020.1289861.00253
CAR5Developing grain, bracts removed (5 DPA)0.5650360.5825590.7073930.607092
CAR15Developing grain, bracts removed (15 DPA)0.2264740.03074920.03611590.275084



CDS Structure of MLOC_72076






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72076.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354971NoneNoneNoneNone
MLOC_72076.1CUST_6119_PI427708080AvailableAvailablecontig_61007 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g59150.1 +1 2e-137 404 204/315 (65%) 13104.m06232 protein peroxidase precursor, putative, expressed
TAIR PP10 AT1G71695.1 +1 5e-92 287 155/316 (49%) Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358