- Predicted Gene MLOC_72047
MLOC_72047 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0.0923678 | 0.0477648 | 0.122803 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.98061 | 17.1424 | 27.4045 | 14.6115 |
INF1 | Young developing inflorescences (5mm) | 0.523079 | 0.695433 | 0.857156 | 0.684205 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.540686 | 0.516823 | 0.581075 | 0.684592 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0465358 | 0 | 0.285616 | 0.0791269 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.4138 | 15.241 | 28.2649 | 44.4483 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.45011 | 4.88365 | 4.21688 | 5.13157 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.278953 | 0.183722 | 0.267927 | 0.653687 |
CDS Structure of MLOC_72047
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72047.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g01044.2 |
-3 |
9e-127 |
389 |
194/250 (78%) |
13110.m00006 protein isoflavone reductase, putative, expressed |
TAIR PP10 |
AT3G18890.1 |
-3 |
2e-106 |
342 |
172/252 (68%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr3:6511169-6514729 FORWARD LENGTH=641 |