MLOC_72047 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.09236780.04776480.122803
LEAShoots from the seedlings (10 cm shoot stage)8.9806117.142427.404514.6115
INF1Young developing inflorescences (5mm)0.5230790.6954330.8571560.684205
INF2Developing inflorescences (1-1.5 cm)0.5406860.5168230.5810750.684592
ROORoots from the seedlings (10 cm shoot stage)0.046535800.2856160.0791269
NODDeveloping tillers at six leaf stage, 3rd internode13.413815.24128.264944.4483
CAR5Developing grain, bracts removed (5 DPA)4.450114.883654.216885.13157
CAR15Developing grain, bracts removed (15 DPA)0.2789530.1837220.2679270.653687



CDS Structure of MLOC_72047






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72047.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355953NoneNoneNoneNone
MLOC_72047.2CUST_18417_PI427708080AvailableAvailablecontig_60742 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g01044.2 -3 9e-127 389 194/250 (78%) 13110.m00006 protein isoflavone reductase, putative, expressed
TAIR PP10 AT3G18890.1 -3 2e-106 342 172/252 (68%) NAD(P)-binding Rossmann-fold superfamily protein | chr3:6511169-6514729 FORWARD LENGTH=641