MLOC_72045 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.486419.463118.7420.4676
LEAShoots from the seedlings (10 cm shoot stage)30.55134.316525.66727.3358
INF1Young developing inflorescences (5mm)13.515312.87515.49612.4581
INF2Developing inflorescences (1-1.5 cm)14.616412.57218.141816.7434
ROORoots from the seedlings (10 cm shoot stage)11.219115.407523.975720.987
NODDeveloping tillers at six leaf stage, 3rd internode19.013315.517116.842155.4349
CAR5Developing grain, bracts removed (5 DPA)12.339713.10312.518113.3274
CAR15Developing grain, bracts removed (15 DPA)31.267327.234229.45272.1838



CDS Structure of MLOC_72045






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72045.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249515.1NoneNoneNoneNone
MLOC_72045.2CUST_6117_PI427708080AvailableAvailablecontig_60946 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g54960.1 -3 6e-123 358 169/225 (75%) 13101.m05777 protein expressed protein
TAIR PP10 AT3G09250.1 -3 3e-66 212 108/215 (50%) Nuclear transport factor 2 (NTF2) family protein | chr3:2839080-2840294 FORWARD LENGTH=244