MLOC_72025 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.052498800.200265
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_72025






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72025.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375812NoneNoneNoneNone
MLOC_72025.1CUST_576_PI427708083AvailableAvailablecontig_60915 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40559.1 +3 0.0 594 319/435 (73%) 13110.m03758 protein exostosin family domain containing protein, expressed
TAIR PP10 AT4G22580.1 +3 9e-147 430 231/401 (58%) Exostosin family protein | chr4:11889382-11890689 REVERSE LENGTH=435