MLOC_7202 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7054850.5809780.623950.679714
LEAShoots from the seedlings (10 cm shoot stage)0.857510.8975390.7210950.754667
INF1Young developing inflorescences (5mm)0.1280670.3281580.5986060.322863
INF2Developing inflorescences (1-1.5 cm)0.4713220.541480.2119940.521085
ROORoots from the seedlings (10 cm shoot stage)1.32270.5244660.5187410.829898
NODDeveloping tillers at six leaf stage, 3rd internode0.386370.4473640.5291111.60617
CAR5Developing grain, bracts removed (5 DPA)1.229121.920953.145222.22445
CAR15Developing grain, bracts removed (15 DPA)155.75119.721174.691361.579



CDS Structure of MLOC_7202






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7202.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7202.1CUST_15744_PI427708080AvailableAvailablecontig_138791 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g06660.1 +1 0.0 888 458/524 (87%) 13101.m00662 protein thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed
TAIR PP10 AT5G01320.1 +1 0.0 801 404/523 (77%) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr5:129484-131625 REVERSE LENGTH=603