MLOC_72007 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.372631.114371.167431.36233
LEAShoots from the seedlings (10 cm shoot stage)0.3122340.7549890.8063940.586577
INF1Young developing inflorescences (5mm)3.31172.565033.321732.98927
INF2Developing inflorescences (1-1.5 cm)3.044722.659263.77664.08503
ROORoots from the seedlings (10 cm shoot stage)0.6266590.547180.4239980.721602
NODDeveloping tillers at six leaf stage, 3rd internode0.7563540.4189720.2506741.08803
CAR5Developing grain, bracts removed (5 DPA)0.1522620.04133210.0416030.0836047
CAR15Developing grain, bracts removed (15 DPA)0.03000650.1068970.08710070.257427



CDS Structure of MLOC_72007






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72007.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361638NoneNoneNoneNone
MLOC_72007.2CUST_6111_PI427708080AvailableAvailablecontig_60871 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g22020.1 -1 6e-98 308 243/373 (65%) 13102.m02467 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT1G25550.1 -1 1e-50 179 145/360 (40%) myb-like transcription factor family protein | chr1:8976644-8977942 FORWARD LENGTH=344