- Predicted Gene MLOC_72002
MLOC_72002 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.271501 | 0.240514 | 0.101418 | 0.200139 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.534007 | 0.222223 | 0.445756 | 0.313094 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.0358488 | 0.0310093 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.234782 | 0.142774 | 0.200544 | 0.222026 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.264236 | 0 | 0.0993025 | 0.0776516 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.937859 | 2.68536 | 2.20442 | 6.73251 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.33724 | 1.79499 | 1.25512 | 1.53888 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0950088 | 0.0853689 | 0 | 0.26381 |
CDS Structure of MLOC_72002
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72002.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g36900.1 |
-3 |
2e-117 |
352 |
212/333 (64%) |
13105.m03827 protein dof zinc finger domain containing protein, putative |
TAIR PP10 |
AT3G52440.1 |
-3 |
1e-33 |
128 |
53/62 (85%) |
Dof-type zinc finger DNA-binding family protein | chr3:19435447-19436190 FORWARD LENGTH=247 |