- Predicted Gene MLOC_71988
MLOC_71988 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71988_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71988_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.47507 | 9.03237 | 8.74103 | 6.44731 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.91725 | 10.4349 | 11.9064 | 8.05723 |
INF1 | Young developing inflorescences (5mm) | 13.2669 | 15.5393 | 14.2082 | 10.876 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.8816 | 22.2998 | 17.993 | 21.0273 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.0326 | 9.52247 | 7.07113 | 9.15597 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.70922 | 10.1311 | 9.21164 | 27.6497 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.8666 | 13.5947 | 12.8671 | 11.5086 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.3234 | 12.2935 | 10.795 | 25.4638 |
CDS Structure of MLOC_71988
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71988.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g15020.2 |
+2 |
2e-82 |
276 |
134/185 (72%) |
13101.m01663 protein lissencephaly type-1-like homology motif, putative, expressed |
TAIR PP10 |
AT5G27030.1 |
+2 |
4e-59 |
210 |
99/166 (60%) |
| Symbols: TPR3 | TOPLESS-related 3 | chr5:9508913-9515263 REVERSE LENGTH=1108 |