MLOC_7198 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_7198_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_7198_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0791794 | 0.215865 | 0 | 0.207683 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 239.595 | 120.652 | 149.271 | 135.482 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0665197 | 0 | 0.0595502 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0564466 | 0 | 0 | 0.0693016 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.845911 | 0.382408 |
NOD | Developing tillers at six leaf stage, 3rd internode | 46.3155 | 12.4567 | 28.2653 | 44.935 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.484512 | 0.709833 | 0.575573 | 0.558289 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.325456 | 0.0714107 | 0.188077 | 0.494023 |
CDS Structure of MLOC_7198
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7198.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52240.1 |
+1 |
5e-119 |
347 |
167/186 (90%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT2G34420.1 |
+1 |
1e-107 |
317 |
159/186 (85%) |
| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265 |