MLOC_71977 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.865672.134111.017112.02574
LEAShoots from the seedlings (10 cm shoot stage)000.06714830.0659571
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.954351.679891.767142.17752
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_71977






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71977.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_71977.1CUST_15737_PI427708080AvailableAvailablecontig_60808 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g13980.1 +3 7e-147 423 202/263 (77%) 13108.m01499 protein glycosyl hydrolases family 16, putative, expressed
TAIR PP10 AT5G57550.1 +3 2e-84 262 131/263 (50%) | Symbols: XTR3, XTH25 | xyloglucan endotransglucosylase/hydrolase 25 | chr5:23305055-23306384 REVERSE LENGTH=284