MLOC_71975 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.750475.736516.543615.37598
LEAShoots from the seedlings (10 cm shoot stage)10.641310.877212.58918.00221
INF1Young developing inflorescences (5mm)4.800386.231546.603634.29666
INF2Developing inflorescences (1-1.5 cm)7.126896.043564.963876.02253
ROORoots from the seedlings (10 cm shoot stage)11.02068.470198.403028.43944
NODDeveloping tillers at six leaf stage, 3rd internode18.076226.962237.816870.3266
CAR5Developing grain, bracts removed (5 DPA)3.930754.035314.609373.46786
CAR15Developing grain, bracts removed (15 DPA)0.9187021.042491.218172.21953



CDS Structure of MLOC_71975






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71975.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_71975.1NoneAvailableAvailablecontig_60800 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64930.1 -3 3e-87 279 155/177 (88%) 13101.m07005 protein expressed protein
TAIR PP10 AT1G21790.1 -3 5e-63 213 115/172 (67%) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr1:7654357-7655691 FORWARD LENGTH=288