MLOC_7196 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 74.6651 | 73.0761 | 74.2003 | 74.5194 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 40.7323 | 58.5448 | 27.0819 | 33.0645 |
| INF1 | Young developing inflorescences (5mm) | 62.345 | 62.4306 | 105.971 | 70.3694 |
| INF2 | Developing inflorescences (1-1.5 cm) | 36.5499 | 31.8375 | 61.7959 | 47.2436 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 52.8005 | 47.5114 | 62.5984 | 54.2651 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 27.5874 | 16.7091 | 1.4994 | 29.3059 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 69.6779 | 73.5373 | 87.5931 | 79.8097 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.29087 | 8.14804 | 9.9789 | 22.4795 |
CDS Structure of MLOC_7196
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7196.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g41960.1 |
+3 |
3e-128 |
383 |
216/345 (63%) |
13104.m04127 protein NADP-dependent oxidoreductase, putative, expressed |
| TAIR PP10 |
AT5G16990.1 |
+3 |
3e-128 |
382 |
211/343 (62%) |
Zinc-binding dehydrogenase family protein | chr5:5581831-5583849 REVERSE LENGTH=343 |
