- Predicted Gene MLOC_71953
MLOC_71953 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.18011 | 0 | 0 | 0.192749 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.119957 | 0.0586358 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.497924 | 0.0754099 | 0 | 0.343322 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.193612 | 0 | 0.334599 | 0.155224 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 91.6584 | 92.7888 | 98.1826 | 69.9688 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 470.774 | 386.673 | 402.924 | 797.725 |
CDS Structure of MLOC_71953
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71953.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g32660.2 |
-1 |
3e-140 |
412 |
190/210 (90%) |
13102.m03539 protein 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT5G03650.1 |
-1 |
5e-126 |
380 |
170/209 (81%) |
| Symbols: SBE2.2 | starch branching enzyme 2.2 | chr5:931924-937470 FORWARD LENGTH=805 |